PTSDgene database

GO Report

Basic Info
ID GO:0005737
Name cytoplasm
Type cellular component
No. of Genes in PTSDgene  109

GO related genes in PTSDgene (count: 109)
Approved Symbol Approved Name Location Type No. of Association Studies (Positive/Negative/Trend) Evidence[PMID]
RARS arginyl-tRNA synthetase 5q35.1 rSNP target 0 IDA
NR3C1 nuclear receptor subfamily 3 group C member 1 5q31-q32 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy, rSNP target 6(2/4/0) IDA[15769988|17635946]
ATE1 arginyltransferase 1 10q26 rSNP target 0 IDA[9858543]
ARRB1 arrestin, beta 1 11q13 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/1/0) IDA[10823817|15611106|16325578]
ASCL2 achaete-scute family bHLH transcription factor 2 11p15.5 rSNP target 0 IDA[12917334]
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 1q23.2 rSNP target 0 IDA
CLIC1 chloride intracellular channel 1 6p21.3 rSNP target 0 IDA[10793131|16791210]
TRIM37 tripartite motif containing 37 17q22 Mapped by Literature SNP, Mapped by LD-proxy, rSNP target 0 IDA[23769972]
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 12p13.3 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 2(0/2/0) IDA[11206130]
CCDC6 coiled-coil domain containing 6 10q21.2 rSNP target 0 IDA
PSMA4 proteasome subunit alpha 4 15q24.1 Mapped by LD-proxy, rSNP target 0 IDA
TRHDE thyrotropin-releasing hormone degrading enzyme 12q21.1 Mapped by LD-proxy 0 IBA
DCTN1 dynactin subunit 1 2p13 rSNP target 0 TAS[1828535]
NOD1 nucleotide binding oligomerization domain containing 1 7p14.3 rSNP target 0 IDA[10329646]; TAS[15967716]
BLMH bleomycin hydrolase 17q11.2 Mapped by LD-proxy 0 IDA
IRF2BP2 interferon regulatory factor 2 binding protein 2 1q42.3 rSNP target 0 IEA
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 9q34 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 4(0/4/0) TAS[3443096]
PPIL4 peptidylprolyl isomerase like 4 6q25.1 rSNP target 0 IDA
PAFAH2 platelet-activating factor acetylhydrolase 2 1p34.3 Mapped by LD-proxy, rSNP target 0 IEA
C6orf47 chromosome 6 open reading frame 47 6p21.3 rSNP target 0 IDA
FRMD5 FERM domain containing 5 15q15.3 Literature-origin, Mapped by Literature SNP 1(0/0/1) IEA
TSPAN1 tetraspanin 1 1p33 rSNP target 0 IDA[12115476]
ZNRF2 zinc and ring finger 2, E3 ubiquitin protein ligase 7p15.1 rSNP target 0 IDA[22797923]
SLC6A3 solute carrier family 6 (neurotransmitter transporter), member 3 5p15.3 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 21(11/10/0) TAS[10823899]
RPL10A ribosomal protein L10a 6p21.31 rSNP target 0 IDA
TROVE2 TROVE domain family member 2 1q31 rSNP target 0 IEA
TMSB10 thymosin beta 10 2p11.2 rSNP target 0 IEA
PRKG1 protein kinase, cGMP-dependent, type I 10q11.2 Literature-origin, Mapped by Literature SNP 1(0/0/1) IDA[21402151]
C8orf37 chromosome 8 open reading frame 37 8q22.1 Literature-origin 1(0/0/1) IDA
BDNF brain-derived neurotrophic factor 11p14.1 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy, rSNP target 19(4/15/0) ISS
AHR aryl hydrocarbon receptor 7p15 Literature-origin 1(0/0/1) IDA[15681594]
RAB5A RAB5A, member RAS oncogene family 3p24.3 rSNP target 0 IDA[21266579]
PRR11 proline rich 11 17q23.2 rSNP target 0 IDA[23246489]
TRIM35 tripartite motif containing 35 8p21.2 rSNP target 0 ISS
MYLIP myosin regulatory light chain interacting protein 6p22.3 rSNP target 0 IEA
TUBD1 tubulin delta 1 17q23.1 rSNP target 0 IDA
VASP vasodilator-stimulated phosphoprotein 19q13.32 Mapped by Literature SNP 0 IDA
APOA1BP apolipoprotein A-I binding protein 1q21 rSNP target 0 IDA
IFRD1 interferon-related developmental regulator 1 7q31.1 rSNP target 0 IEA
GHRHR growth hormone releasing hormone receptor 7p14 rSNP target 0 IDA[10461027]
STMN1 stathmin 1 1p36.11 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy, rSNP target 6(1/5/0) IBA
CAST calpastatin 5q15 rSNP target 0 IDA
TP53 tumor protein p53 17p13.1 rSNP target 0 IDA[7720704|14744935|15340061|16131611|20096447|20810912]
PRKCA protein kinase C, alpha 17q24.2 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 10(9/0/1) IDA[15632189|23990668]
KIAA1456 KIAA1456 8p22 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/0/1) TAS
APOB apolipoprotein B 2p24-p23 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/0/1) IDA[22580899]
GARS glycyl-tRNA synthetase 7p15 Mapped by LD-proxy, rSNP target 0 IDA
USP25 ubiquitin specific peptidase 25 21q11.2 Literature-origin 1(0/0/1) IDA
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome 22q11.21 Mapped by Literature SNP, Mapped by LD-proxy 0 IEA
ACTC1 actin, alpha, cardiac muscle 1 15q14 rSNP target 0 IDA[20962418]
RNF14 ring finger protein 14 5q23.3-q31.1 rSNP target 0 IDA[11322894]
PTK2B protein tyrosine kinase 2 beta 8p21.1 Mapped by LD-proxy 0 IDA
RGS2 regulator of G-protein signaling 2 1q31 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy, rSNP target 7(2/5/0) IBA; IDA[11278586]
EPHX2 epoxide hydrolase 2 8p21 Mapped by LD-proxy, rSNP target 0 IDA
TBC1D15 TBC1 domain family member 15 12q15 Mapped by LD-proxy, rSNP target 0 ISS
GULP1 GULP, engulfment adaptor PTB domain containing 1 2q32.3-q33 Mapped by LD-proxy, rSNP target 0 IEA
HIST2H2BE histone cluster 2, H2be 1q21.2 rSNP target 0 IDA
HEXIM1 hexamethylene bis-acetamide inducible 1 17q21.31 rSNP target 0 IDA[12581153]
UNC13C unc-13 homolog C (C. elegans) 15q21.3 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/0/1) IEA
NASP nuclear autoantigenic sperm protein (histone-binding) 1p34.1 rSNP target 0 IEA
ZC3H12D zinc finger CCCH-type containing 12D 6q25.1 rSNP target 0 IDA[19531561]
PTPN7 protein tyrosine phosphatase, non-receptor type 7 1q32.1 rSNP target 0 IDA[10940933|14613483]
THNSL1 threonine synthase like 1 10p12.31 rSNP target 0 IDA
IMPDH1 IMP (inosine 5'-monophosphate) dehydrogenase 1 7q31.3-q32 rSNP target 0 IDA[14766016]
GABBR2 gamma-aminobutyric acid (GABA) B receptor, 2 9q22.1-q22.3 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/0/1) IEA
ERC1 ELKS/RAB6-interacting/CAST family member 1 12p13.3 rSNP target 0 ISS; TAS[15218148]
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) 19q13 rSNP target 0 IDA
ELF5 E74-like factor 5 (ets domain transcription factor) 11p13-p12 Mapped by Literature SNP, Mapped by LD-proxy 0 IEA
SERGEF secretion regulating guanine nucleotide exchange factor 11p14.3 Mapped by LD-proxy, rSNP target 0 IDA[10571079]
TH tyrosine hydroxylase 11p15.5 Literature-origin, Mapped by Literature SNP 1(0/1/0) IDA[10907721]
JAK1 Janus kinase 1 1p32.3-p31.3 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/0/1) IDA[10502458]
CDK1 cyclin-dependent kinase 1 10q21.2 rSNP target 0 IDA
ARHGAP27 Rho GTPase activating protein 27 17q21.31 rSNP target 0 IDA
DDX39B DEAD-box helicase 39B 6p21.33 Mapped by LD-proxy 0 IDA[21859714]
MTRNR2L5 MT-RNR2-like 5 10q21.1 Literature-origin 1(0/0/1) IEA
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha 11p15.5-p14 rSNP target 0 IDA[21081650]
RPS29 ribosomal protein S29 14q21.3 Literature-origin 1(0/0/1) IDA
HEBP2 heme binding protein 2 6q24 rSNP target 0 IDA[17098234]
CAPRIN1 cell cycle associated protein 1 11p13 rSNP target 0 IDA
LSMEM1 leucine-rich single-pass membrane protein 1 7q31.1 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/0/1) IDA
POLB polymerase (DNA directed), beta 8p12-p11 rSNP target 0 IDA[15725623|19713937|21362556]
DTNBP1 dystrobrevin binding protein 1 6p22.3 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 5(2/3/0) ISS
IREB2 iron responsive element binding protein 2 15q25.1 rSNP target 0 NAS[7983023]
NANS N-acetylneuraminate synthase 9p24.1-p23 rSNP target 0 NAS[10749855]
HOOK3 hook microtubule-tethering protein 3 8p11.21 rSNP target 0 IDA
UBE2U ubiquitin conjugating enzyme E2U (putative) 1p31.3 Literature-origin, Mapped by Literature SNP 1(0/0/1) IBA
ANP32B acidic nuclear phosphoprotein 32 family member B 9q22.32 rSNP target 0 IDA[17178712]
AKT3 v-akt murine thymoma viral oncogene homolog 3 1q44 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/0/1) IDA
SIK3 SIK family kinase 3 11q23.3 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/0/1) IEA
AUNIP aurora kinase A and ninein interacting protein 1p36.11 Mapped by LD-proxy, rSNP target 0 IEA
RPH3AL rabphilin 3A-like (without C2 domains) 17p13.3 rSNP target 0 TAS[9367993]
UBE2E3 ubiquitin conjugating enzyme E2E 3 2q31.3 Literature-origin 1(0/0/1) IEA
NOS1 nitric oxide synthase 1 12q24.22 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(1/0/0) TAS[17892502]
WWC1 WW and C2 domain containing 1 5q34 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 6(6/0/0) IDA[16684779|18190796]
KIF18A kinesin family member 18A 11p14.1 Mapped by Literature SNP, Mapped by LD-proxy, rSNP target 0 IDA[17006958|18680169]
NCAM1 neural cell adhesion molecule 1 11q23.2 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/1/0) IDA
NDRG1 N-myc downstream regulated 1 8q24 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/0/1) IDA[9766676]
ASL argininosuccinate lyase 7q11.21 rSNP target 0 TAS[282632]
ARL8A ADP ribosylation factor like GTPase 8A 1q32.1 rSNP target 0 IDA[15331635]
RGS7 regulator of G-protein signaling 7 1q43 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy 1(0/0/1) IBA
LIN7C lin-7 homolog C (C. elegans) 11p14 rSNP target 0 IDA[23201090]
LRRC41 leucine rich repeat containing 41 1p34.1 rSNP target 0 IEA
TECRL trans-2,3-enoyl-CoA reductase-like 4q13.1 Literature-origin 1(0/0/1) IEA
APOE apolipoprotein E 19q13.31 Literature-origin, Mapped by Literature SNP, Mapped by LD-proxy, rSNP target 6(2/4/0) NAS[8083695]; TAS[9622609]
CDC73 cell division cycle 73 1q25 rSNP target 0 IDA
RAVER2 ribonucleoprotein, PTB-binding 2 1p31.3 Mapped by LD-proxy 0 IEA
PARD6B par-6 family cell polarity regulator beta 20q13.13 rSNP target 0 IDA
CKAP2L cytoskeleton associated protein 2 like 2q13 rSNP target 0 IEA
BPIFB4 BPI fold containing family B member 4 20q11.21 Mapped by Literature SNP, Mapped by LD-proxy 0 IEA