SNP Report
Name | rs4576167 dbSNP Ensembl | ||
---|---|---|---|
Location | 5:168459692 - 168459692(+) | ||
Variant Seq | C | ||
Ancestral Allele | G | ||
Ref Seq | G | ||
Minor Allele Frequence | 0.256989 | ||
Annotation | intron_variant; non_coding_transcript_variant | ||
Variant Effect | intron_variant(ENST00000524038, ENST00000393895, ENST00000265293, ENST00000522140, ENST00000619752, ENST00000524228, ENST00000521089); non_coding_transcript_variant(ENST00000522140) | ||
SIFT Annotation | tolerated | ||
SIFT Variant Effect | tolerated(ENST00000524038, ENST00000619752, ENST00000393895, ENST00000524228, ENST00000521089, ENST00000265293) | ||
PolyPhen Annotation | benign | ||
PolyPhen Variant Effect | benign(ENST00000524038, ENST00000619752, ENST00000393895, ENST00000524228, ENST00000521089, ENST00000265293) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | Chromatin interactive region | ||
Chromatin State | Weak transcription;Strong transcription | ||
No. of Marker's Association Results | 4 (Positive: 4; Negative: 0; Trend: 0) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.