SNP Report

Basic Info
Name |
rs2337219
dbSNP
Ensembl
|
Location |
5:168451861 - 168451861(+) |
Variant Seq |
A |
Ancestral Allele |
A |
Ref Seq |
T |
Minor Allele Frequence |
0.247005 |
Annotation |
intron_variant; non_coding_transcript_variant
|
Variant Effect |
intron_variant(ENST00000524228, ENST00000393895, ENST00000524038, ENST00000521089, ENST00000524093, ENST00000619752, ENST00000522140, ENST00000265293); non_coding_transcript_variant(ENST00000524093, ENST00000522140)
|
SIFT Annotation |
tolerated
|
SIFT Variant Effect |
tolerated(ENST00000524038, ENST00000524228, ENST00000265293, ENST00000521089, ENST00000619752, ENST00000393895)
|
PolyPhen Annotation |
benign
|
PolyPhen Variant Effect |
benign(ENST00000524038, ENST00000524228, ENST00000265293, ENST00000521089, ENST00000619752, ENST00000393895)
|
rSNP? |
Yes
Link in rVarBase
|
Related Regulatory Elements |
n/a
|
Chromatin State |
Weak transcription;Strong transcription
|
No. of Marker's Association Results |
0 (Positive: 0; Negative: 0; Trend: 0) |
Source |
LD-proxy |

SNP related association results

SNP related genes (count: 1)

SNPs in LD with rs2337219 (count: 0)

SNP related eQTL (count: 1)