SNP Report

Basic Info
Name |
rs34197361
dbSNP
Ensembl
|
Location |
5:168457120 - 168457120(+) |
Variant Seq |
C |
Ancestral Allele |
A |
Ref Seq |
A |
Minor Allele Frequence |
0.269569 |
Annotation |
downstream_gene_variant; intron_variant; non_coding_transcript_variant
|
Variant Effect |
downstream_gene_variant(ENST00000524093); intron_variant(ENST00000524038, ENST00000265293, ENST00000522140, ENST00000524228, ENST00000521089, ENST00000393895, ENST00000619752); non_coding_transcript_variant(ENST00000522140)
|
SIFT Annotation |
deleterious
|
SIFT Variant Effect |
deleterious(ENST00000524228, ENST00000521089, ENST00000265293, ENST00000393895, ENST00000524038, ENST00000619752)
|
PolyPhen Annotation |
benign; possibly_damaging; probably_damaging
|
PolyPhen Variant Effect |
benign(ENST00000393895); possibly_damaging(ENST00000265293); probably_damaging(ENST00000524228, ENST00000521089, ENST00000524038, ENST00000619752)
|
rSNP? |
Yes
Link in rVarBase
|
Related Regulatory Elements |
n/a
|
Chromatin State |
Weak transcription;Strong transcription;ZNF genes & repeats
|
No. of Marker's Association Results |
0 (Positive: 0; Negative: 0; Trend: 0) |
Source |
LD-proxy |

SNP related association results

SNP related genes (count: 1)

SNPs in LD with rs34197361 (count: 0)

SNP related eQTL (count: 1)