SNP Report
Name | rs6314 dbSNP Ensembl | ||
---|---|---|---|
Location | 13:46834899 - 46834899(+) | ||
Variant Seq | A | ||
Ancestral Allele | G | ||
Ref Seq | G | ||
Minor Allele Frequence | 0.0746805 | ||
Annotation | missense_variant | ||
Variant Effect | missense_variant(ENST00000543956, ENST00000378688, ENST00000542664) | ||
SIFT Annotation | tolerated_-_low_confidence; tolerated | ||
SIFT Variant Effect | tolerated_-_low_confidence(ENST00000543956); tolerated(ENST00000378688, ENST00000542664) | ||
PolyPhen Annotation | benign | ||
PolyPhen Variant Effect | benign(ENST00000543956, ENST00000378688, ENST00000542664) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | n/a | ||
Chromatin State | Weak transcription | ||
No. of Marker's Association Results | 1 (Positive: 1; Negative: 0; Trend: 0) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.