SNP Report
Basic Info
| Name | rs7325168 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 13:46832596 - 46832596(+) | ||
| Variant Seq | C | ||
| Ancestral Allele | C | ||
| Ref Seq | T | ||
| Minor Allele Frequence | 0.0886581 | ||
| Annotation | 3_prime_UTR_variant | ||
| Variant Effect | 3_prime_UTR_variant(ENST00000378688, ENST00000543956, ENST00000542664) | ||
| SIFT Annotation | deleterious | ||
| SIFT Variant Effect | deleterious(ENST00000543956, ENST00000542664, ENST00000378688) | ||
| PolyPhen Annotation | probably_damaging | ||
| PolyPhen Variant Effect | probably_damaging(ENST00000543956, ENST00000542664, ENST00000378688) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | lncRNA | ||
| Chromatin State | Weak transcription;Enhancers | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| HTR2A | 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled | 13q14-q21 | 4(2/2/0) |
SNPs in LD with rs7325168 (count: 0)
SNP related eQTL (count: 1)