SNP Report
Name | rs53576 dbSNP Ensembl | ||
---|---|---|---|
Location | 3:8762685 - 8762685(+) | ||
Variant Seq | G | ||
Ancestral Allele | G | ||
Ref Seq | A | ||
Minor Allele Frequence | 0.389377 | ||
Annotation | intron_variant; non_coding_transcript_variant | ||
Variant Effect | intron_variant(ENST00000316793, ENST00000472766); non_coding_transcript_variant(ENST00000472766) | ||
SIFT Annotation | tolerated | ||
SIFT Variant Effect | tolerated(ENST00000316793) | ||
PolyPhen Annotation | benign | ||
PolyPhen Variant Effect | benign(ENST00000316793) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | Chromatin interactive region | ||
Chromatin State | Weak transcription;Genic enhancers;Transcr. at gene 5' nd 3';Enhancers | ||
No. of Marker's Association Results | 2 (Positive: 0; Negative: 2; Trend: 0) | ||
Source | Literature |