SNP Report
Name | rs4646996 dbSNP Ensembl | ||
---|---|---|---|
Location | 3:114130718 - 114130718(+) | ||
Variant Seq | T | ||
Ancestral Allele | C | ||
Ref Seq | C | ||
Minor Allele Frequence | 0.440495 | ||
Annotation | intron_variant | ||
Variant Effect | intron_variant(ENST00000460779, ENST00000467632, ENST00000383673, ENST00000295881) | ||
SIFT Annotation | deleterious; tolerated | ||
SIFT Variant Effect | deleterious(ENST00000460779, ENST00000467632, ENST00000383673); tolerated(ENST00000295881) | ||
PolyPhen Annotation | benign; probably_damaging | ||
PolyPhen Variant Effect | benign(ENST00000295881); probably_damaging(ENST00000460779, ENST00000467632, ENST00000383673) | ||
rSNP? | No Link in rVarBase | ||
Related Regulatory Elements | n/a | ||
Chromatin State | Inactive region | ||
No. of Marker's Association Results | 1 (Positive: 1; Negative: 0; Trend: 0) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.