SNP Report
Name | rs1130864 dbSNP Ensembl | ||
---|---|---|---|
Location | 1:159713301 - 159713301(+) | ||
Variant Seq | A | ||
Ancestral Allele | G | ||
Ref Seq | G | ||
Minor Allele Frequence | 0.204673 | ||
Annotation | 3_prime_UTR_variant; intron_variant; non_coding_transcript_variant | ||
Variant Effect | 3_prime_UTR_variant(ENST00000255030); intron_variant(ENST00000473196, ENST00000489317, ENST00000437342, ENST00000368112, ENST00000368110, ENST00000368111); non_coding_transcript_variant(ENST00000473196, ENST00000489317) | ||
SIFT Annotation | deleterious; tolerated | ||
SIFT Variant Effect | deleterious(ENST00000437342); tolerated(ENST00000255030) | ||
PolyPhen Annotation | possibly_damaging | ||
PolyPhen Variant Effect | possibly_damaging(ENST00000255030, ENST00000437342) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | n/a | ||
Chromatin State | Active TSS;Enhancers | ||
No. of Marker's Association Results | 2 (Positive: 2; Negative: 0; Trend: 0) | ||
Source | Literature |