SNP Report
Name | rs10055255 dbSNP Ensembl | ||
---|---|---|---|
Location | 5:76968168 - 76968168(+) | ||
Variant Seq | T | ||
Ancestral Allele | T | ||
Ref Seq | A | ||
Minor Allele Frequence | 0.466653 | ||
Annotation | intron_variant; non_coding_transcript_variant | ||
Variant Effect | intron_variant(ENST00000274368, ENST00000503763, ENST00000514258); non_coding_transcript_variant(ENST00000503763, ENST00000514258) | ||
SIFT Annotation | deleterious; tolerated | ||
SIFT Variant Effect | deleterious(ENST00000274368); tolerated(ENST00000506501) | ||
PolyPhen Annotation | probably_damaging | ||
PolyPhen Variant Effect | probably_damaging(ENST00000506501, ENST00000274368) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | n/a | ||
Chromatin State | Weak transcription;Strong transcription | ||
No. of Marker's Association Results | 1 (Positive: 1; Negative: 0; Trend: 0) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.