SNP Report

Basic Info
Name |
rs74939664
dbSNP
Ensembl
|
Location |
1:82481654 - 82481654(+) |
Variant Seq |
C |
Ancestral Allele |
T |
Ref Seq |
T |
Minor Allele Frequence |
0.033147 |
Annotation |
upstream_gene_variant
|
SIFT Annotation |
tolerated
|
SIFT Variant Effect |
tolerated(ENST00000627151, ENST00000370725, ENST00000449420, ENST00000370721, ENST00000370730, ENST00000402328, ENST00000370728, ENST00000319517, ENST00000370723, ENST00000370727, ENST00000370717, ENST00000359929)
|
PolyPhen Annotation |
benign; probably_damaging
|
PolyPhen Variant Effect |
benign(ENST00000449420); probably_damaging(ENST00000627151, ENST00000370725, ENST00000370721, ENST00000370730, ENST00000402328, ENST00000370728, ENST00000319517, ENST00000370723, ENST00000370727, ENST00000370717, ENST00000359929)
|
rSNP? |
Yes
Link in rVarBase
|
Related Regulatory Elements |
n/a
|
Chromatin State |
Weak transcription
|
No. of Marker's Association Results |
1 (Positive: 0; Negative: 0; Trend: 1) |
Source |
Literature |

SNP related association results

SNP related genes (count: 1)

SNPs in LD with rs74939664 (count: 0)

SNP related eQTL (count: 1)