PTSDgene database

SNP Report

Basic Info
Name rs61784641 dbSNP Ensembl
Location 1:46416662 - 46416662(+)
Variant Seq C
Ancestral Allele T
Ref Seq T
Minor Allele Frequence 0.407748
Annotation downstream_gene_variant
Variant Effect downstream_gene_variant(ENST00000484697, ENST00000243167)
SIFT Annotation tolerated
SIFT Variant Effect tolerated(ENST00000243167)
PolyPhen Annotation benign
PolyPhen Variant Effect benign(ENST00000243167)
rSNP? Yes Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Weak transcription;Enhancers
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Association Results (Positive/Negative/Trend)
FAAH fatty acid amide hydrolase 1p35-p34 8(3/5/0)

SNPs in LD with rs61784641 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
CRHR1 Yes Adipose Subcutaneous cis GTEx