SNP Report
Name | rs514743 dbSNP Ensembl | ||
---|---|---|---|
Location | 15:78591885 - 78591885(+) | ||
Variant Seq | A | ||
Ancestral Allele | A | ||
Ref Seq | T | ||
Minor Allele Frequence | 0.241214 | ||
Annotation | downstream_gene_variant; upstream_gene_variant; intron_variant | ||
Variant Effect | downstream_gene_variant(ENST00000559658, ENST00000326828, ENST00000348639, ENST00000559002); upstream_gene_variant(ENST00000567141); intron_variant(ENST00000394802, ENST00000559576, ENST00000299565, ENST00000559554) | ||
SIFT Annotation | tolerated_-_low_confidence; deleterious_-_low_confidence; tolerated | ||
SIFT Variant Effect | tolerated_-_low_confidence(ENST00000348639); deleterious_-_low_confidence(ENST00000348639); tolerated(ENST00000299565) | ||
PolyPhen Annotation | benign | ||
PolyPhen Variant Effect | benign(ENST00000348639, ENST00000299565) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | Chromatin interactive region | ||
Chromatin State | Weak transcription | ||
No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
Source | LD-proxy |