SNP Report
Name | rs4239715 dbSNP Ensembl | ||
---|---|---|---|
Location | 20:16157604 - 16157604(+) | ||
Variant Seq | G | ||
Ancestral Allele | A | ||
Ref Seq | A | ||
Minor Allele Frequence | 0.474042 | ||
Annotation | downstream_gene_variant | ||
SIFT Annotation | deleterious_-_low_confidence; deleterious | ||
SIFT Variant Effect | deleterious_-_low_confidence(ENST00000407045); deleterious(ENST00000378058, ENST00000402914) | ||
PolyPhen Annotation | possibly_damaging; probably_damaging | ||
PolyPhen Variant Effect | possibly_damaging(ENST00000407045); probably_damaging(ENST00000378058, ENST00000402914) | ||
rSNP? | No Link in rVarBase | ||
Related Regulatory Elements | N.A. | ||
Chromatin State | N.A. | ||
No. of Marker's Association Results | 1 (Positive: 0; Negative: 0; Trend: 1) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.