SNP Report
Basic Info
| Name | rs1799836 dbSNP Ensembl | ||
|---|---|---|---|
| Location | X:43768752 - 43768752(+) | ||
| Variant Seq | C | ||
| Ancestral Allele | T | ||
| Ref Seq | T | ||
| Minor Allele Frequence | 0.456689 | ||
| Annotation | intron_variant | ||
| Variant Effect | intron_variant(ENST00000378069) | ||
| SIFT Annotation | tolerated | ||
| SIFT Variant Effect | tolerated(ENST00000378069) | ||
| PolyPhen Annotation | benign | ||
| PolyPhen Variant Effect | benign(ENST00000378069) | ||
| rSNP? | No Link in rVarBase | ||
| Related Regulatory Elements | N.A. | ||
| Chromatin State | N.A. | ||
| No. of Marker's Association Results | 2 (Positive: 1; Negative: 1; Trend: 0) | ||
| Source | Literature | ||
SNP related association results
| Reference | Phenotype | Statistical Values | Author Comments | Marker's Category |
|---|---|---|---|---|
| Svob Strac, D.,2016 | PTSD symptom severity | X2=6.176, df=2, P-value=0.046 X2=6.176, df=2, P-value=0.046 | A marginally significant association was found between MAOB ...... A marginally significant association was found between MAOB rs1799836 polymorphism and severity of PTSD symptoms. More... | Significant |
| Svob Strac, D.,2016 | PTSD symptoms | U=6530.0, P-value=0.336 U=6530.0, P-value=0.336 | Carriers of G or A allele of MAOB rs1799836 did not differ i...... Carriers of G or A allele of MAOB rs1799836 did not differ in their total CAPS scores. More... | Non-significant |
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| MAOB | monoamine oxidase B | Xp11.4-p11.3 | 3(1/2/0) |
SNPs in LD with rs1799836 (count: 0)
SNP related eQTL (count: 1)