SNP Report
Name | rs12911602 dbSNP Ensembl | ||
---|---|---|---|
Location | 15:78599107 - 78599107(+) | ||
Variant Seq | C | ||
Ancestral Allele | T | ||
Ref Seq | T | ||
Minor Allele Frequence | 0.310104 | ||
Annotation | downstream_gene_variant; upstream_gene_variant; intron_variant; NMD_transcript_variant | ||
Variant Effect | downstream_gene_variant(ENST00000558903, ENST00000624172, ENST00000299565); upstream_gene_variant(ENST00000559002); intron_variant(ENST00000326828, ENST00000559658, ENST00000348639); NMD_transcript_variant(ENST00000559658) | ||
SIFT Annotation | tolerated | ||
SIFT Variant Effect | tolerated(ENST00000559658, ENST00000348639, ENST00000326828) | ||
PolyPhen Annotation | possibly_damaging | ||
PolyPhen Variant Effect | possibly_damaging(ENST00000559658, ENST00000348639, ENST00000326828) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | Chromatin interactive region | ||
Chromatin State | Weak transcription;Strong transcription | ||
No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
Source | LD-proxy |