SNP Report
Name | rs10737854 dbSNP Ensembl | ||
---|---|---|---|
Location | 1:241186819 - 241186819(+) | ||
Variant Seq | A | ||
Ancestral Allele | G | ||
Ref Seq | G | ||
Minor Allele Frequence | 0.433506 | ||
Annotation | intron_variant | ||
Variant Effect | intron_variant(ENST00000366563, ENST00000348120, ENST00000366565, ENST00000366564) | ||
SIFT Annotation | tolerated | ||
SIFT Variant Effect | tolerated(ENST00000366563, ENST00000348120, ENST00000366564, ENST00000401882, ENST00000366565) | ||
PolyPhen Annotation | benign; possibly_damaging | ||
PolyPhen Variant Effect | benign(ENST00000366563, ENST00000348120, ENST00000366564, ENST00000401882); possibly_damaging(ENST00000366565) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | n/a | ||
Chromatin State | Weak transcription | ||
No. of Marker's Association Results | 1 (Positive: 0; Negative: 0; Trend: 1) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.