SNP Report
Basic Info
| Name | rs9833347 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 3:42274814 - 42274814(+) | ||
| Variant Seq | A | ||
| Ancestral Allele | A | ||
| Ref Seq | C | ||
| Minor Allele Frequence | 0.145367 | ||
| Annotation | downstream_gene_variant; upstream_gene_variant | ||
| SIFT Annotation | tolerated | ||
| SIFT Variant Effect | tolerated(ENST00000334681, ENST00000434608, ENST00000396169) | ||
| PolyPhen Annotation | benign | ||
| PolyPhen Variant Effect | benign(ENST00000334681, ENST00000434608, ENST00000396169) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | Chromatin interactive region | ||
| Chromatin State | Enhancers;Weak transcription | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| CCK | cholecystokinin | 3p22.1 | 1(1/0/0) |
SNPs in LD with rs9833347 (count: 0)
SNP related eQTL (count: 1)