SNP Report
Basic Info
| Name | rs7928213 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 11:34466738 - 34466738(+) | ||
| Variant Seq | A | ||
| Ref Seq | G | ||
| Minor Allele Frequence | 0.263578 | ||
| Annotation | downstream_gene_variant; upstream_gene_variant; intron_variant; non_coding_transcript_variant | ||
| Variant Effect | downstream_gene_variant(ENST00000530343); upstream_gene_variant(ENST00000534710); intron_variant(ENST00000525707, ENST00000241052); non_coding_transcript_variant(ENST00000525707) | ||
| SIFT Annotation | tolerated | ||
| SIFT Variant Effect | tolerated(ENST00000241052) | ||
| PolyPhen Annotation | probably_damaging | ||
| PolyPhen Variant Effect | probably_damaging(ENST00000241052) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | TF binding region | ||
| Chromatin State | Weak transcription;ZNF genes & repeats;Strong transcription | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| CAT | catalase | 11p13 | 1(1/0/0) |
SNPs in LD with rs7928213 (count: 0)
SNP related eQTL (count: 1)