SNP Report
Basic Info
| Name | rs7786849 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 7:31124112 - 31124112(+) | ||
| Variant Seq | T | ||
| Ancestral Allele | T | ||
| Ref Seq | C | ||
| Minor Allele Frequence | 0.356629 | ||
| Annotation | upstream_gene_variant | ||
| Variant Effect | upstream_gene_variant(ENST00000438721) | ||
| SIFT Annotation | deleterious | ||
| SIFT Variant Effect | deleterious(ENST00000409363, ENST00000409489, ENST00000304166, ENST00000614107, ENST00000396211) | ||
| PolyPhen Annotation | benign; possibly_damaging; probably_damaging | ||
| PolyPhen Variant Effect | benign(ENST00000304166); possibly_damaging(ENST00000614107, ENST00000396211); probably_damaging(ENST00000409363, ENST00000409489) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | Chromatin interactive region | ||
| Chromatin State | Weak transcription | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| GHRHR | growth hormone releasing hormone receptor | 7p14 | rSNP target |
SNPs in LD with rs7786849 (count: 0)
SNP related eQTL (count: 1)