SNP Report
Basic Info
| Name | rs7756263 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 6:149032140 - 149032140(+) | ||
| Variant Seq | T | ||
| Ancestral Allele | A | ||
| Ref Seq | A | ||
| Minor Allele Frequence | 0.221246 | ||
| Annotation | intron_variant; non_coding_transcript_variant | ||
| Variant Effect | intron_variant(ENST00000433442, ENST00000367463); non_coding_transcript_variant(ENST00000433442) | ||
| SIFT Annotation | deleterious | ||
| SIFT Variant Effect | deleterious(ENST00000367463) | ||
| PolyPhen Annotation | benign | ||
| PolyPhen Variant Effect | benign(ENST00000367463) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | Chromatin interactive region | ||
| Chromatin State | Weak transcription;Enhancers;Genic enhancers;Flanking Active TSS;Active TSS;Strong transcription | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 3)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| TAB2 | TGF-beta activated kinase 1/MAP3K7 binding protein 2 | 6q25.1 | rSNP target |
| UST | uronyl-2-sulfotransferase | 6q25.1 | 1(0/0/1) |
| PPIL4 | peptidylprolyl isomerase like 4 | 6q25.1 | rSNP target |
SNPs in LD with rs7756263 (count: 0)
SNP related eQTL (count: 1)