SNP Report
Name | rs7684329 dbSNP Ensembl | ||
---|---|---|---|
Location | 4:33745802 - 33745802(+) | ||
Variant Seq | T | ||
Ancestral Allele | C | ||
Ref Seq | C | ||
Minor Allele Frequence | 0.202476 | ||
Annotation | upstream_gene_variant | ||
SIFT Annotation | deleterious; tolerated | ||
SIFT Variant Effect | deleterious(ENST00000621961); tolerated(ENST00000511884) | ||
PolyPhen Annotation | benign | ||
PolyPhen Variant Effect | benign(ENST00000511884, ENST00000621961) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | n/a | ||
Chromatin State | Active TSS | ||
No. of Marker's Association Results | 1 (Positive: 0; Negative: 0; Trend: 1) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.