SNP Report
Name | rs73220799 dbSNP Ensembl | ||
---|---|---|---|
Location | 12:94120632 - 94120632(+) | ||
Variant Seq | A,T | ||
Ancestral Allele | C | ||
Ref Seq | C | ||
Minor Allele Frequence | 0.063099 | ||
Annotation | downstream_gene_variant | ||
SIFT Annotation | tolerated_-_low_confidence | ||
SIFT Variant Effect | tolerated_-_low_confidence(ENST00000548483) | ||
PolyPhen Annotation | benign | ||
PolyPhen Variant Effect | benign(ENST00000548483) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | n/a | ||
Chromatin State | Weak transcription;Enhancers | ||
No. of Marker's Association Results | 1 (Positive: 0; Negative: 0; Trend: 1) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.