SNP Report
Name | rs6947982 dbSNP Ensembl | ||
---|---|---|---|
Location | 7:30619934 - 30619934(+) | ||
Variant Seq | T | ||
Ancestral Allele | C | ||
Ref Seq | C | ||
Minor Allele Frequence | 0.404553 | ||
Annotation | upstream_gene_variant; intron_variant; non_coding_transcript_variant | ||
Variant Effect | upstream_gene_variant(ENST00000470392, ENST00000444666); intron_variant(ENST00000389266, ENST00000484093, LRG_243t1, ENST00000478124); non_coding_transcript_variant(ENST00000484093, ENST00000478124) | ||
SIFT Annotation | tolerated | ||
SIFT Variant Effect | tolerated(ENST00000389266, LRG_243t1) | ||
PolyPhen Annotation | benign | ||
PolyPhen Variant Effect | benign(ENST00000389266, LRG_243t1) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | TF binding region | ||
Chromatin State | Strong transcription;Weak transcription | ||
No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
Source | LD-proxy |