SNP Report
Basic Info
| Name | rs6670926 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 1:46421848 - 46421848(+) | ||
| Variant Seq | C | ||
| Ancestral Allele | C | ||
| Ref Seq | T | ||
| Minor Allele Frequence | 0.297923 | ||
| Annotation | downstream_gene_variant; intron_variant; NMD_transcript_variant | ||
| SIFT Annotation | deleterious | ||
| SIFT Variant Effect | deleterious(ENST00000243167) | ||
| PolyPhen Annotation | benign | ||
| PolyPhen Variant Effect | benign(ENST00000243167) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | Chromatin interactive region | ||
| Chromatin State | Weak transcription;Enhancers | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| NSUN4 | NOP2/Sun RNA methyltransferase family member 4 | 1p34 | Mapped by LD-proxy, rSNP target |
SNPs in LD with rs6670926 (count: 0)
SNP related eQTL (count: 1)