PTSDgene database

SNP Report

Basic Info
Name rs6355 dbSNP Ensembl
Location 17:30221792 - 30221792(+)
Variant Seq G
Ancestral Allele C
Ref Seq C
Minor Allele Frequence 0.00698882
Annotation missense_variant
Variant Effect missense_variant(ENST00000261707, ENST00000394821, ENST00000401766)
SIFT Annotation tolerated
SIFT Variant Effect tolerated(ENST00000261707, ENST00000394821, ENST00000401766)
PolyPhen Annotation benign
PolyPhen Variant Effect benign(ENST00000261707, ENST00000394821, ENST00000401766)
rSNP? Yes Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Weak transcription;Enhancers;Flanking Active TSS
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Association Results (Positive/Negative/Trend)
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 17q11.2 44(13/31/0)

SNPs in LD with rs6355 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
DND1P1 No Adipose Subcutaneous cis GTEx