SNP Report
Name | rs62056850 dbSNP Ensembl | ||
---|---|---|---|
Location | 17:45915215 - 45915215(+) | ||
Variant Seq | T | ||
Ancestral Allele | C | ||
Ref Seq | C | ||
Minor Allele Frequence | 0.0874601 | ||
Annotation | upstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant | ||
Variant Effect | upstream_gene_variant(ENST00000574252); intron_variant(ENST00000535772, ENST00000570299, ENST00000262410, ENST00000344290, ENST00000571311, ENST00000340799, ENST00000446361, ENST00000334239, ENST00000351559); NMD_transcript_variant(ENST00000571311); non_coding_transcript_variant(ENST00000570299) | ||
SIFT Annotation | tolerated | ||
SIFT Variant Effect | tolerated(ENST00000329196) | ||
PolyPhen Annotation | benign | ||
PolyPhen Variant Effect | benign(ENST00000329196) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | TF binding region | ||
Chromatin State | Weak transcription;Enhancers;Genic enhancers;Strong transcription | ||
No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
Source | LD-proxy |