SNP Report
Name | rs62055556 dbSNP Ensembl | ||
---|---|---|---|
Location | 17:45889383 - 45889383(+) | ||
Variant Seq | C | ||
Ancestral Allele | C | ||
Ref Seq | T | ||
Minor Allele Frequence | 0.0860623 | ||
Annotation | upstream_gene_variant; intron_variant; non_coding_transcript_variant | ||
Variant Effect | upstream_gene_variant(ENST00000351559, ENST00000262410, ENST00000344290, ENST00000535772, ENST00000340799); intron_variant(ENST00000579599, ENST00000634876, ENST00000579244); non_coding_transcript_variant(ENST00000579599, ENST00000634876, ENST00000579244) | ||
SIFT Annotation | tolerated | ||
SIFT Variant Effect | tolerated(ENST00000329196) | ||
PolyPhen Annotation | benign | ||
PolyPhen Variant Effect | benign(ENST00000329196) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | TF binding region;Chromatin interactive region | ||
Chromatin State | Inactive region | ||
No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
Source | LD-proxy |