SNP Report
Name | rs4773155 dbSNP Ensembl | ||
---|---|---|---|
Location | 13:110318719 - 110318719(+) | ||
Variant Seq | C | ||
Ancestral Allele | A | ||
Ref Seq | A | ||
Minor Allele Frequence | 0.478634 | ||
Annotation | intron_variant; non_coding_transcript_variant | ||
Variant Effect | intron_variant(ENST00000400163, ENST00000480771, ENST00000360467); non_coding_transcript_variant(ENST00000480771) | ||
SIFT Annotation | tolerated | ||
SIFT Variant Effect | tolerated(ENST00000375820) | ||
PolyPhen Annotation | benign; probably_damaging | ||
PolyPhen Variant Effect | benign(ENST00000375820); probably_damaging(ENST00000543140) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | n/a | ||
Chromatin State | Weak transcription;Genic enhancers;Strong transcription;Enhancers | ||
No. of Marker's Association Results | 1 (Positive: 0; Negative: 0; Trend: 1) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.