SNP Report
Name | rs4503014 dbSNP Ensembl | ||
---|---|---|---|
Location | 7:31109526 - 31109526(+) | ||
Variant Seq | G | ||
Ancestral Allele | A | ||
Ref Seq | A | ||
Minor Allele Frequence | 0.394968 | ||
Annotation | downstream_gene_variant; 3_prime_UTR_variant | ||
Variant Effect | downstream_gene_variant(ENST00000396211, ENST00000409489, ENST00000409363, ENST00000436116); 3_prime_UTR_variant(ENST00000614107, ENST00000304166) | ||
SIFT Annotation | deleterious; tolerated | ||
SIFT Variant Effect | deleterious(ENST00000396211, ENST00000614107, ENST00000409489); tolerated(ENST00000304166, ENST00000409363) | ||
PolyPhen Annotation | probably_damaging | ||
PolyPhen Variant Effect | probably_damaging(ENST00000396211, ENST00000304166, ENST00000614107, ENST00000409363, ENST00000409489) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | lncRNA | ||
Chromatin State | Weak transcription | ||
No. of Marker's Association Results | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.