SNP Report
Basic Info
| Name | rs3779247 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 7:31061090 - 31061090(+) | ||
| Variant Seq | G | ||
| Ancestral Allele | G | ||
| Ref Seq | C | ||
| Minor Allele Frequence | 0.226837 | ||
| Annotation | upstream_gene_variant; intron_variant | ||
| Variant Effect | upstream_gene_variant(ENST00000409489, ENST00000396211); intron_variant(ENST00000409363, ENST00000614107, ENST00000304166, ENST00000431811) | ||
| SIFT Annotation | deleterious | ||
| SIFT Variant Effect | deleterious(ENST00000326139, ENST00000409904) | ||
| PolyPhen Annotation | benign | ||
| PolyPhen Variant Effect | benign(ENST00000326139, ENST00000409904) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | TF binding region | ||
| Chromatin State | Enhancers;Weak transcription;Active TSS | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| ADCYAP1R1 | adenylate cyclase activating polypeptide 1 (pituitary) receptor type I | 7p14.3 | 19(8/11/0) |
SNPs in LD with rs3779247 (count: 0)
SNP related eQTL (count: 1)