SNP Report
Name | rs265983 dbSNP Ensembl | ||
---|---|---|---|
Location | 5:175408114 - 175408114(+) | ||
Variant Seq | T | ||
Ancestral Allele | T | ||
Ref Seq | A | ||
Minor Allele Frequence | 0.302516 | ||
Annotation | downstream_gene_variant | ||
SIFT Annotation | deleterious; tolerated | ||
SIFT Variant Effect | deleterious(ENST00000507785); tolerated(ENST00000239243) | ||
PolyPhen Annotation | benign; probably_damaging | ||
PolyPhen Variant Effect | benign(ENST00000239243); probably_damaging(ENST00000507785) | ||
rSNP? | No Link in rVarBase | ||
Related Regulatory Elements | n/a | ||
Chromatin State | Inactive region | ||
No. of Marker's Association Results | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
Source | Literature |
The LD data used here is based on 1000 Genome Phase I. LD SNP pairs were selected with a threshold r2<=0.8.