SNP Report

Basic Info
Name |
rs2267738
dbSNP
Ensembl
|
Location |
7:31097210 - 31097210(+) |
Variant Seq |
G |
Ancestral Allele |
G |
Ref Seq |
A |
Minor Allele Frequence |
0.327476 |
Annotation |
intron_variant
|
Variant Effect |
intron_variant(ENST00000436116, ENST00000409363, ENST00000396211, ENST00000409489, ENST00000304166, ENST00000614107)
|
SIFT Annotation |
deleterious
|
SIFT Variant Effect |
deleterious(ENST00000409363, ENST00000409489, ENST00000304166, ENST00000614107, ENST00000396211)
|
PolyPhen Annotation |
benign; possibly_damaging; probably_damaging
|
PolyPhen Variant Effect |
benign(ENST00000304166); possibly_damaging(ENST00000614107, ENST00000396211); probably_damaging(ENST00000409363, ENST00000409489)
|
rSNP? |
Yes
Link in rVarBase
|
Related Regulatory Elements |
n/a
|
Chromatin State |
Weak transcription;Enhancers;Strong transcription
|
No. of Marker's Association Results |
1 (Positive: 0; Negative: 1; Trend: 0) |
Source |
Literature |

SNP related association results

SNP related genes (count: 1)

SNPs in LD with rs2267738 (count: 0)

SNP related eQTL (count: 1)