SNP Report
Basic Info
| Name | rs2267737 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 7:31096996 - 31096996(+) | ||
| Variant Seq | A | ||
| Ancestral Allele | A | ||
| Ref Seq | C | ||
| Minor Allele Frequence | 0.472444 | ||
| Annotation | intron_variant | ||
| Variant Effect | intron_variant(ENST00000614107, ENST00000409489, ENST00000409363, ENST00000396211, ENST00000304166, ENST00000436116) | ||
| SIFT Annotation | deleterious_-_low_confidence | ||
| SIFT Variant Effect | deleterious_-_low_confidence(ENST00000396211, ENST00000409489, ENST00000614107) | ||
| PolyPhen Annotation | possibly_damaging | ||
| PolyPhen Variant Effect | possibly_damaging(ENST00000396211, ENST00000409489, ENST00000614107) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | n/a | ||
| Chromatin State | Weak transcription;Enhancers;Strong transcription | ||
| No. of Marker's Association Results | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
| Source | Literature | ||
SNP related association results
| Reference | Phenotype | Statistical Values | Author Comments | Marker's Category |
|---|---|---|---|---|
| Ressler, K. J.,2011 | PTSD diagnosis | Females: P-value=0.557, males: P-value=0.669 Females: P-value=0.557, males: P-value=0.669 | No significant result in females or males after multiple cor...... No significant result in females or males after multiple corrections. More... | Non-significant |
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| ADCYAP1R1 | adenylate cyclase activating polypeptide 1 (pituitary) receptor type I | 7p14.3 | 19(8/11/0) |
SNPs in LD with rs2267737 (count: 0)
SNP related eQTL (count: 1)