SNP Report
Name | rs2242593 dbSNP Ensembl | ||
---|---|---|---|
Location | 11:113405543 - 113405543(+) | ||
Variant Seq | C | ||
Ancestral Allele | T | ||
Ref Seq | T | ||
Minor Allele Frequence | 0.208866 | ||
Annotation | downstream_gene_variant; intron_variant; non_coding_transcript_variant | ||
Variant Effect | downstream_gene_variant(ENST00000346454, ENST00000362072, ENST00000542968, ENST00000544518); intron_variant(ENST00000546284); non_coding_transcript_variant(ENST00000546284) | ||
SIFT Annotation | deleterious | ||
SIFT Variant Effect | deleterious(ENST00000303941) | ||
PolyPhen Annotation | possibly_damaging | ||
PolyPhen Variant Effect | possibly_damaging(ENST00000303941) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | n/a | ||
Chromatin State | Weak transcription;Enhancers | ||
No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
Source | LD-proxy |