SNP Report
Basic Info
| Name | rs2180048 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 6:99033434 - 99033434(+) | ||
| Variant Seq | A | ||
| Ancestral Allele | G | ||
| Ref Seq | G | ||
| Minor Allele Frequence | 0.16853 | ||
| Annotation | upstream_gene_variant | ||
| SIFT Annotation | deleterious_-_low_confidence | ||
| SIFT Variant Effect | deleterious_-_low_confidence(ENST00000229971, ENST00000369244) | ||
| PolyPhen Annotation | benign | ||
| PolyPhen Variant Effect | benign(ENST00000229971, ENST00000369244) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | n/a | ||
| Chromatin State | Weak transcription;Enhancers | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 0)
SNPs in LD with rs2180048 (count: 0)
SNP related eQTL (count: 1)