PTSDgene database

SNP Report

Basic Info
Name rs190526 dbSNP Ensembl
Location 8:130812621 - 130812621(+)
Variant Seq T
Ancestral Allele A
Ref Seq A
Annotation intron_variant
Variant Effect intron_variant(ENST00000377928, ENST00000286355)
SIFT Annotation tolerated
SIFT Variant Effect tolerated(ENST00000377928, ENST00000286355)
PolyPhen Annotation probably_damaging; possibly_damaging
PolyPhen Variant Effect probably_damaging(ENST00000286355); possibly_damaging(ENST00000377928)
rSNP? Yes Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Weak transcription
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Association Results (Positive/Negative/Trend)
ADCY8 adenylate cyclase 8 (brain) 8q24 1(0/0/1)

SNPs in LD with rs190526 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
RP11-259G18.3 No Adipose Subcutaneous cis GTEx