SNP Report

Basic Info
Name |
rs17763515
dbSNP
Ensembl
|
Location |
17:45840452 - 45840452(+) |
Variant Seq |
A |
Ancestral Allele |
A |
Ref Seq |
G |
Minor Allele Frequence |
0.086262 |
Annotation |
downstream_gene_variant; upstream_gene_variant; intron_variant; non_coding_transcript_variant
|
Variant Effect |
downstream_gene_variant(ENST00000314537, ENST00000398285, ENST00000634540, ENST00000347197, ENST00000339069, ENST00000579599, ENST00000619154, ENST00000581125, ENST00000579244, ENST00000535778, ENST00000293493); upstream_gene_variant(ENST00000329196); intron_variant(ENST00000634876); non_coding_transcript_variant(ENST00000634876)
|
SIFT Annotation |
deleterious
|
SIFT Variant Effect |
deleterious(ENST00000329196)
|
PolyPhen Annotation |
possibly_damaging
|
PolyPhen Variant Effect |
possibly_damaging(ENST00000329196)
|
rSNP? |
Yes
Link in rVarBase
|
Related Regulatory Elements |
Chromatin interactive region
|
Chromatin State |
Weak transcription;Bivalent Enhancer;Enhancers
|
No. of Marker's Association Results |
0 (Positive: 0; Negative: 0; Trend: 0) |
Source |
LD-proxy |

SNP related association results

SNP related genes (count: 3)

SNPs in LD with rs17763515 (count: 0)

SNP related eQTL (count: 1)