SNP Report
Basic Info
| Name | rs17307291 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 16:55664598 - 55664598(+) | ||
| Variant Seq | A | ||
| Ancestral Allele | A | ||
| Ref Seq | G | ||
| Minor Allele Frequence | 0.250399 | ||
| Annotation | intron_variant | ||
| Variant Effect | intron_variant(ENST00000568655, ENST00000566163, ENST00000568943, ENST00000219833, ENST00000561820, ENST00000414754, ENST00000379906, ENST00000568529) | ||
| SIFT Annotation | deleterious | ||
| SIFT Variant Effect | deleterious(ENST00000567238) | ||
| PolyPhen Annotation | unknown | ||
| PolyPhen Variant Effect | unknown(ENST00000567238) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | n/a | ||
| Chromatin State | Enhancers;Bivalent Enhancer;Weak transcription | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| SLC6A2 | solute carrier family 6 (neurotransmitter transporter), member 2 | 16q12.2 | 13(4/9/0) |
SNPs in LD with rs17307291 (count: 0)
SNP related eQTL (count: 1)