SNP Report
Name | rs1558064 dbSNP Ensembl | ||
---|---|---|---|
Location | 7:30603453 - 30603453(+) | ||
Variant Seq | A | ||
Ancestral Allele | C | ||
Ref Seq | C | ||
Minor Allele Frequence | 0.399161 | ||
Annotation | downstream_gene_variant; intron_variant; non_coding_transcript_variant | ||
Variant Effect | downstream_gene_variant(ENST00000454308); intron_variant(LRG_243t1, ENST00000389266, ENST00000478124); non_coding_transcript_variant(ENST00000478124) | ||
SIFT Annotation | tolerated | ||
SIFT Variant Effect | tolerated(ENST00000389266, LRG_243t1) | ||
PolyPhen Annotation | possibly_damaging | ||
PolyPhen Variant Effect | possibly_damaging(ENST00000389266, LRG_243t1) | ||
rSNP? | Yes Link in rVarBase | ||
Related Regulatory Elements | Chromatin interactive region | ||
Chromatin State | Strong transcription;Weak transcription | ||
No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
Source | LD-proxy |