SNP Report

Basic Info
Name |
rs1362621
dbSNP
Ensembl
|
Location |
16:55654572 - 55654572(+) |
Variant Seq |
A |
Ancestral Allele |
A |
Ref Seq |
G |
Minor Allele Frequence |
0.23742 |
Annotation |
upstream_gene_variant
|
Variant Effect |
upstream_gene_variant(ENST00000566163, ENST00000568943, ENST00000379906, ENST00000219833, ENST00000561820, ENST00000414754, ENST00000568655, ENST00000568529)
|
SIFT Annotation |
tolerated
|
SIFT Variant Effect |
tolerated(ENST00000219833, ENST00000568943, ENST00000561820, ENST00000379906, ENST00000414754, ENST00000566163, ENST00000568529, ENST00000568655)
|
PolyPhen Annotation |
benign
|
PolyPhen Variant Effect |
benign(ENST00000219833, ENST00000568943, ENST00000561820, ENST00000379906, ENST00000414754, ENST00000566163, ENST00000568529, ENST00000568655)
|
rSNP? |
Yes
Link in rVarBase
|
Related Regulatory Elements |
TF binding region
|
Chromatin State |
Bivalent Enhancer
|
No. of Marker's Association Results |
0 (Positive: 0; Negative: 0; Trend: 0) |
Source |
LD-proxy |

SNP related association results

SNP related genes (count: 1)

SNPs in LD with rs1362621 (count: 0)

SNP related eQTL (count: 1)