SNP Report

Basic Info
Name |
rs10277350
dbSNP
Ensembl
|
Location |
7:31070153 - 31070153(+) |
Variant Seq |
T |
Ancestral Allele |
C |
Ref Seq |
C |
Minor Allele Frequence |
0.125 |
Annotation |
intron_variant
|
Variant Effect |
intron_variant(ENST00000409489, ENST00000614107, ENST00000304166, ENST00000431811, ENST00000396211, ENST00000409363)
|
SIFT Annotation |
tolerated_-_low_confidence; tolerated
|
SIFT Variant Effect |
tolerated_-_low_confidence(ENST00000396211, ENST00000614107, ENST00000409489); tolerated(ENST00000431811, ENST00000409363, ENST00000304166)
|
PolyPhen Annotation |
benign; possibly_damaging
|
PolyPhen Variant Effect |
benign(ENST00000396211, ENST00000614107, ENST00000431811, ENST00000409363, ENST00000304166); possibly_damaging(ENST00000409489)
|
rSNP? |
Yes
Link in rVarBase
|
Related Regulatory Elements |
n/a
|
Chromatin State |
Weak transcription;Genic enhancers;Enhancers;Strong transcription
|
No. of Marker's Association Results |
1 (Positive: 0; Negative: 1; Trend: 0) |
Source |
Literature |

SNP related association results

SNP related genes (count: 1)

SNPs in LD with rs10277350 (count: 0)

SNP related eQTL (count: 1)