SNP Report

Basic Info
Name |
rs10269014
dbSNP
Ensembl
|
Location |
7:31089123 - 31089123(+) |
Variant Seq |
C |
Ancestral Allele |
T |
Ref Seq |
T |
Minor Allele Frequence |
0.164337 |
Annotation |
intron_variant
|
Variant Effect |
intron_variant(ENST00000304166, ENST00000436116, ENST00000409489, ENST00000409363, ENST00000614107, ENST00000396211)
|
SIFT Annotation |
deleterious
|
SIFT Variant Effect |
deleterious(ENST00000304166, ENST00000614107, ENST00000396211, ENST00000409363, ENST00000409489)
|
PolyPhen Annotation |
probably_damaging; possibly_damaging
|
PolyPhen Variant Effect |
probably_damaging(ENST00000614107, ENST00000396211, ENST00000409363, ENST00000409489); possibly_damaging(ENST00000304166)
|
rSNP? |
Yes
Link in rVarBase
|
Related Regulatory Elements |
n/a
|
Chromatin State |
Weak transcription
|
No. of Marker's Association Results |
1 (Positive: 0; Negative: 1; Trend: 0) |
Source |
Literature |

SNP related association results

SNP related genes (count: 1)

SNPs in LD with rs10269014 (count: 0)

SNP related eQTL (count: 1)