SNP Report

Basic Info
Name |
rs10268647
dbSNP
Ensembl
|
Location |
7:31075262 - 31075262(+) |
Variant Seq |
G |
Ancestral Allele |
A |
Ref Seq |
A |
Minor Allele Frequence |
0.0716853 |
Annotation |
intron_variant
|
Variant Effect |
intron_variant(ENST00000409489, ENST00000396211, ENST00000431811, ENST00000614107, ENST00000409363, ENST00000304166)
|
SIFT Annotation |
tolerated_-_low_confidence; tolerated
|
SIFT Variant Effect |
tolerated_-_low_confidence(ENST00000409489, ENST00000304166, ENST00000614107, ENST00000396211, ENST00000409363); tolerated(ENST00000431811)
|
PolyPhen Annotation |
benign
|
PolyPhen Variant Effect |
benign(ENST00000409489, ENST00000304166, ENST00000614107, ENST00000431811, ENST00000396211, ENST00000409363)
|
rSNP? |
Yes
Link in rVarBase
|
Related Regulatory Elements |
n/a
|
Chromatin State |
Weak transcription;Strong transcription;Enhancers;Genic enhancers;Bivalent Enhancer
|
No. of Marker's Association Results |
1 (Positive: 0; Negative: 1; Trend: 0) |
Source |
Literature |

SNP related association results

SNP related genes (count: 1)

SNPs in LD with rs10268647 (count: 0)

SNP related eQTL (count: 1)