PTSDgene database

SNP Report

Basic Info
Name rs972524 dbSNP Ensembl
Location 1:166816265 - 166816265(+)
Variant Seq C
Ancestral Allele C
Ref Seq G
Minor Allele Frequence 0.0628994
Annotation downstream_gene_variant
SIFT Annotation deleterious
SIFT Variant Effect deleterious(ENST00000354422, ENST00000456900, ENST00000338353, ENST00000435676, ENST00000441649)
PolyPhen Annotation probably_damaging
PolyPhen Variant Effect probably_damaging(ENST00000354422, ENST00000456900, ENST00000338353, ENST00000435676, ENST00000441649)
rSNP? No Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Inactive region
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs972524 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
LURAP1 No Adipose Subcutaneous cis GTEx