PTSDgene database

SNP Report

Basic Info
Name rs9569117 dbSNP Ensembl
Location 13:54862604 - 54862604(+)
Variant Seq T
Ancestral Allele C
Ref Seq C
Minor Allele Frequence 0.193091
Annotation upstream_gene_variant
SIFT Annotation deleterious
SIFT Variant Effect deleterious(ENST00000219022)
PolyPhen Annotation benign
PolyPhen Variant Effect benign(ENST00000219022)
rSNP? No Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Inactive region
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs9569117 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
RP11-707O23.5 No Adipose Subcutaneous cis GTEx