SNP Report
Basic Info
| Name | rs853175 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 5:143257225 - 143257225(+) | ||
| Variant Seq | C | ||
| Ancestral Allele | C | ||
| Ref Seq | T | ||
| Minor Allele Frequence | 0.384385 | ||
| Annotation | intron_variant; NMD_transcript_variant; non_coding_transcript_variant | ||
| SIFT Annotation | tolerated | ||
| SIFT Variant Effect | tolerated(ENST00000378004, ENST00000418236, ENST00000443674, ENST00000274498) | ||
| PolyPhen Annotation | benign; possibly_damaging | ||
| PolyPhen Variant Effect | benign(ENST00000378004, ENST00000418236); possibly_damaging(ENST00000443674, ENST00000274498) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | n/a | ||
| Chromatin State | Weak transcription | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 0)
SNPs in LD with rs853175 (count: 0)
SNP related eQTL (count: 1)