PTSDgene database

SNP Report

Basic Info
Name rs7687615 dbSNP Ensembl
Location 4:34129235 - 34129235(+)
Variant Seq G
Ancestral Allele G
Ref Seq A
Minor Allele Frequence 0.254992
Annotation intron_variant; non_coding_transcript_variant
Variant Effect intron_variant(ENST00000514877, ENST00000513843); non_coding_transcript_variant(ENST00000514877, ENST00000513843)
SIFT Annotation deleterious; tolerated
SIFT Variant Effect deleterious(ENST00000621961); tolerated(ENST00000511884)
PolyPhen Annotation benign
PolyPhen Variant Effect benign(ENST00000511884, ENST00000621961)
rSNP? No Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Inactive region
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs7687615 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
CRHR1-IT1 Yes Adipose Subcutaneous cis GTEx