SNP Report
Basic Info
| Name | rs7116782 dbSNP Ensembl | ||
|---|---|---|---|
| Location | 11:113380216 - 113380216(+) | ||
| Variant Seq | G | ||
| Ancestral Allele | A | ||
| Ref Seq | A | ||
| Minor Allele Frequence | 0.239018 | ||
| Annotation | intron_variant | ||
| Variant Effect | intron_variant(ENST00000393020) | ||
| SIFT Annotation | deleterious | ||
| SIFT Variant Effect | deleterious(ENST00000303941, ENST00000542948) | ||
| PolyPhen Annotation | benign; probably_damaging | ||
| PolyPhen Variant Effect | benign(ENST00000542948); probably_damaging(ENST00000303941) | ||
| rSNP? | Yes Link in rVarBase | ||
| Related Regulatory Elements | n/a | ||
| Chromatin State | Weak transcription | ||
| No. of Marker's Association Results | 0 (Positive: 0; Negative: 0; Trend: 0) | ||
| Source | LD-proxy | ||
SNP related association results
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Association Results (Positive/Negative/Trend)  |
|---|---|---|---|
| TTC12 | tetratricopeptide repeat domain 12 | 11q23.2 | Mapped by LD-proxy |
SNPs in LD with rs7116782 (count: 0)
SNP related eQTL (count: 1)