PTSDgene database

SNP Report

Basic Info
Name rs6684156 dbSNP Ensembl
Location 1:192793275 - 192793275(+)
Variant Seq G
Ancestral Allele A
Ref Seq A
Minor Allele Frequence 0.314297
Annotation upstream_gene_variant
Variant Effect upstream_gene_variant(ENST00000454090)
SIFT Annotation tolerated
SIFT Variant Effect tolerated(ENST00000235382)
PolyPhen Annotation benign
PolyPhen Variant Effect benign(ENST00000235382)
rSNP? Yes Link in rVarBase
Related Regulatory Elements n/a
Chromatin State Weak transcription;Enhancers
No. of Marker's Association Results 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related association results


SNP related genes (count: 0)

SNPs in LD with rs6684156 (count: 0)

SNP related eQTL (count: 1)
Gene Symbol Gene Existed in PTSDgene? Tissue Trans/Cis Source
LURAP1 No Adipose Subcutaneous cis GTEx